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This meeting took place in 2006



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Systems Biology: Integrating Biology, Technology and Computation (C6)


Organizer(s) Alan Aderem and Leroy E. Hood
March 5—10, 2006
Sagebrush Inn & Suites • Taos, New Mexico USA
Abstract Deadline: Nov 3, 2005
Late Abstract Deadline: Nov 28, 2005
Scholarship Deadline: Nov 3, 2005
Early Registration Deadline: Jan 5, 2006

Supported by The Director's Fund

Summary of Meeting:
Biological inquiry has undergone a number of profound changes. Early studies emphasized complex systems, whereas recent studies have shied away from complexity, instead focusing on detailed knowledge of circumscribed physiologic, cellular and molecular entities. The sequencing of the human genome, in concert with emerging genomic and proteomic technologies, permits the definition of a complete and dynamic parts list of all biological systems. When harnessed with powerful new computational approaches it will be possible to obtain a comprehensive molecular description of complex biological processes. This meeting will focus on the symbiotic interplay between biology, technology, and computation that lies at the heart of systems biology.

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No registration fees are used to fund entertainment or alcohol at this conference

Conference Program    Print  |   View meeting in 12 hr (am/pm) time


SUNDAY, MARCH 5

15:00—19:30
Registration

Chamisa Lobby
18:30—19:30
Refreshments

Chamisa Lobby
19:30—20:30
Keynote Address
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
Eric H. Davidson, California Institute of Technology, USA
Systems Approaches to Sea Urchin Development


MONDAY, MARCH 6

07:00—08:00
Breakfast

Los Vaqueros
08:00—11:00
Systems Biology of Prokaryotes
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
Elizabeth A. Winzeler, University of California, San Diego, USA
Applied Systems Biology: Using Genomics to Find New Therapies for Malaria

* Adam P. Arkin, University of California, Berkeley, USA
Adversity, Diversity and Design: Dynamics of Cellular Networks From Bacterial Signaling to Desigh of a Tumor Killing Bactirium

Nitin S. Baliga, Institute for Systems Biology, USA
From Genome to Network in Four Years: Formulating a Productive Model for Whole Cell Environmental Responses

Björn Titz, Forschungszentrum Karlsruhe, Germany
Short Talk: The Protein Interaction Map of T. pallidum – A Minimal Prokaryotic Genome

09:20—09:40
Coffee Break

Chamisa Lobby
11:00—13:00
Poster Setup

Chamisa Ballroom 2
13:00—22:00
Poster Viewing

Chamisa Ballroom 2
16:30—17:00
Coffee Available

Chamisa Lobby
17:00—19:00
The Impact of Genomics and Proteomics on Dissecting Complex Biological Processes
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
* Rudolf H. Aebersold, Institute of Molecular Systems Biology, ETH Zürich, Switzerland
Quantitative Proteomics and Systems Biology

Brian T. Chait, Rockefeller University, USA
Analyzing Complex Biological Machines

Ronald W. Davis, Stanford University, USA
New Genomic Technologies for Systems Biology

Aditya P. Singh, University of New Mexico, USA
Short Talk: A Detailed Kinetic Model for a Bistable Genetic Network

19:00—20:00
Social Hour with Lite Bites

Chamisa Ballroom 2
19:30—22:00
Poster Session 1

Chamisa Ballroom 2

TUESDAY, MARCH 7

07:00—08:00
Breakfast

Los Vaqueros
08:00—11:00
Systems Biology of Eukaryotes
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
John D. Aitchison, Institute for Systems Biology, USA
Systems Biology Applied to Organelle Biogenesis

Michael S. Levine, Princeton University, USA
A Regulatory Network Controlling Drosophila Gastrulation

* Richard A. Young, Whitehead Institute for Biomedical Research, USA
Transcriptional Regulating Circutry

Alan Aderem, Center for Infectious Disease Research, USA
A Systems Approach to Dissecting Immunity

Leor S. Weinberger, Gladstone Institutes, USA
Short Talk: A Tale of Two Circuits: How HIV and Herpes Use Simple Feedback Motifs to Control Lifecycle Choices

09:20—09:40
Coffee Break

Chamisa Lobby
11:00—13:00
Poster Setup

Chamisa Ballroom 2
13:00—22:00
Poster Viewing

Chamisa Ballroom 2
16:30—17:00
Coffee Available

Chamisa Lobby
17:00—19:00
Dynamic Network Analysis
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
Hamid Bolouri, Institute for Systems Biology, USA
Three Computational Aids for Reconstruction of Genetic Regulatory Networks in Developing Embryos

* Peer Bork, European Molecular Biology Laboratory, Germany
Towards Dynamic Protein Networks

Trey Ideker, University of California, San Diego, USA
Protein Network Comparative Genomics

Insuk Lee, Yonsei University, South Korea
Short Talk: A Probabilistic Functional Gene Network of Yeast: A Conceptual Framework for Systems Biology

19:00—20:00
Social Hour with Lite Bites

Chamisa Ballroom 2
19:30—22:00
Poster Session 2

Chamisa Ballroom 2

WEDNESDAY, MARCH 8

07:00—08:00
Breakfast

Los Vaqueros
08:00—11:00
Emerging Technologies
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
* Jim R. Heath, California Institute of Technology, USA
Nanosystems Biology and in vitro and in vivo Diagnostics of Cancer

Stephen Quake, Stanford University, USA
Biological Large Scale Integration

George M. Whitesides, Harvard University, USA
New Frontiers in Microfluidics

Richard Bonneau, New York University, USA
The Human Proteome Folding Project: Automated Function Annotation from Rosetta Structure Prediction for >90 Representative Genomes

Gal F. Almogy, Stanford University, USA
Short Talk: A Novel Analog-Like Artificial Regulation System

09:20—09:40
Coffee Break

Chamisa Lobby
11:00—13:00
Poster Setup

Chamisa Ballroom 2
13:00—22:00
Poster Viewing

Chamisa Ballroom 2
16:30—17:00
Coffee Available

Chamisa Lobby
17:00—19:00
Using Comparative Genomics to Decipher Biological Information
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
* Eric D. Green, NHGRI, National Institutes of Health, USA
Deducing Mammalian Genome Function by Multi-Species Comparative Sequencing

Edward M. Rubin, Lawrence Berkeley National Laboratory, USA
Comparative Genomic Based Analysis

Svante Pääbo, Max Planck Institute for Evolutionary Anthropology, Germany
Comparitive Primate Genomics

Marc Vidal, Dana-Farber Cancer Institute, USA

19:00—20:00
Social Hour with Lite Bites

Chamisa Ballroom 2
19:30—22:00
Poster Session 3

Chamisa Ballroom 2

THURSDAY, MARCH 9

07:00—08:00
Breakfast

Los Vaqueros
08:00—11:00
New Approaches and Opportunities
Meeting has ended...abstracts no longer viewable online.

Michael Tyers, University of Montreal, Canada
Systematic Analysis and Perturbation of Biological Networks

* Bernhard O. Palsson, University of California, San Diego, USA
Genome-Scale Analysis of E. coli Adaptation to New Growth Environments, Including Re-Sequencing, Location Analysis and Expression Profiling

Terry Gaasterland, University of California, San Diego, USA
RNA Control Networks: microRNAs and their Targets in Plants and Plankton

Michael E. Phelps, University of California, Los Angeles, USA
Molecular Imaging Assays of Protein Targets with PET: From Mice to Patients

Vincent Rouilly, Imperial College London, UK
Short Talk: Integrated Laboratory Information System for in Silico Experiment Validation

09:20—09:40
Coffee Break

Chamisa Lobby
16:30—17:00
Coffee Available

Chamisa Lobby
17:00—19:00
The Promise of Systems Biology for Medicine
Meeting has ended...abstracts no longer viewable online.

Chamisa Ballroom 1
Zhanzhi Hu, University of Texas at Austin, USA
Short Talk: Reconstruction of the Functional Network of Transcriptional Regulation in Saccharomyces cerevisiae

Stuart K. Kim, Stanford University Medical Center, USA
Systems Biology of Aging

Leroy E. Hood, Institute for Systems Biology, USA
Systems Medicine and a Systems Approach to Disease

19:00—20:00
Social Hour with Lite Bites

Chamisa Ballroom 2
20:00—23:00
Entertainment

Chamisa Ballroom 2

FRIDAY, MARCH 10

 
Departure


*Session Chair †Invited, not yet responded.



We gratefully acknowledge support for this conference from:


Directors' Fund


These generous unrestricted gifts allow our Directors to schedule meetings in a wide variety of important areas, many of which are in the early stages of research.

Click here to view all of the donors who support the Directors' Fund.



We gratefully acknowledge the generous grant for this conference provided by:


National Institutes of Health

Grant No. 1R13 GM077016-01




We gratefully acknowledge additional support for this conference from:

Novartis Institutes for BioMedical Research Royal Society of Chemistry

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